Search Strains

More Fields See WormTagDB for other published tagged loci.
Strain Species Genotype Add
RB2042 C. elegans grl-5(ok2700) V. Show Description
Y47D7A.5. Homozygous. Outer Left Sequence: TTTTTCCCTCTTTATCCCGC. Outer Right Sequence: TGTAAATGTTGTTCCACCGC. Inner Left Sequence: CCAGCCCAACCTAAGCCTAA. Inner Right Sequence: AAACTTTCTGCAAAATGCTCTACA. Inner Primer PCR Length: 1187 bp. Deletion Size: 365 bp. Deletion left flank: AGAAATTATTAGTTCAAAAGTACACCAGTC. Deletion right flank: AACTCCAGTGTCAATATCCATAACATCCAC. Attribution: This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
RB2043 C. elegans ZK1307.1(ok2701) II. Show Description
ZK1307.1. Homozygous. Outer Left Sequence: TCACCTCCTTATTGGTTGCC. Outer Right Sequence: ATTTGCCGGTGTCTTTTGAG. Inner Left Sequence: TGCAGGTGGGTAGTAGAGGG. Inner Right Sequence: AGATTTACAAGGGTTCGGGG. Inner Primer PCR Length: 1193 bp. Deletion Size: 626 bp. Deletion left flank: ATCTGGAAGACCCTCTGTTTGCTCCATTGT. Deletion right flank: AACAATGTACACCCGTGGTCATTTTATTAT. Attribution: This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
RB2044 C. elegans C30A5.3(ok2702) III. Show Description
C30A5.3 Homozygous. Outer Left Sequence: aacgtcttggtgtcgagctt. Outer Right Sequence: ggtgatccgttcgtagagga. Inner Left Sequence: ggtcgcatttgttccagaat. Inner Right Sequence: cagcccatttttgcagtttt. Inner Primer PCR Length: 3126. Deletion size: about 2000 bp. Attribution: This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
RB2045 C. elegans spp-1&umps-1(ok2703) III. Show Description
T07C4.4 & T07C4.1 Homozygous. Outer Left Sequence: agaaccgaggagcttcaaca. Outer Right Sequence: acgagaagcgacgatagcat. Inner Left Sequence: gatgctgcgttgtccagtag. Inner Right Sequence: tgaaaaatccggagagccta. Inner Primer PCR Length: 1229. Deletion size: about 700 bp. Attribution: This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
RB2046 C. elegans cyp-35A3(ok2709) V. Show Description
K09D9.2. Homozygous. Outer Left Sequence: AAACGGCGGTAAATATGCAG. Outer Right Sequence: GTTTTCCATGTGGCTCGAAT. Inner Left Sequence: AGACTTTCCGGAATATGGGG. Inner Right Sequence: TTTGCCAAAGATTCTCCCAG. Inner Primer PCR Length: 1107 bp. Deletion Size: 345 bp. Deletion left flank: ATTACTAAGTTCATATCCATTCAGATGCTC. Deletion right flank: AAGAATAGAAGACATAAAATCTGGAAAATA. Insertion Sequence: TGACATTGATAAATCAGCAAAGAAAAATCAGCATTGATAAATCAGCA. Attribution: This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
VC2127 C. elegans mog-4(ok2708)/mT1 II; +/mT1 [dpy-10(e128)] III. Show Description
C04H5.6. Apparent homozygous lethal deletion chromosome balanced by dpy-10-marked translocation. Heterozygotes are WT, and segregate WT, arrested mT1 aneuploids, sterile Dpys (mT1 homozygotes), and ok2708 homozygotes (arrest stage/phenotype undetermined). Pick WT and check for correct segregation of progeny to maintain. External left primer: AATCTTCGCCTGCAAATCAC. External right primer: TTCATGCCGTACCTGTTCAA. Internal left primer: TCTTCGATCCCAGTGCTTTC. Internal right primer: AAGGAGCAAAACTTCGATGG. Internal WT amplicon: 3202 bp. Deletion size: 2453 bp. Deletion left flank: ATACCAAAATATCGCCGGGAAGTGGCTGGG. Deletion right flank: GCGAATAAAAGTCGAAAAAAAAATGTTTTG. Insertion Sequence: ATTTTTTTTCGTTTTTTTTTGGGTTTATTCGAAGTATTGATTAAAATTTAAGAGCGATC GATTTTTTTCTTAATTAAAAACAAAAATCCTGAATGTTTGGTTTTTTTGCTGTTTTTGT AAATGTTCTAAAAATTACCTATAACTAGCCAAATCGGGTTCGTTGAGAAACTCTCTGAG CAGCATTCCGTCTGTCATGTATTTGAGGACAGTCTTCTCCGATGTGCAATCCTCGAAAC GAATACTGTAGCCGACCTGGAAAATGGAAGCGTTTCGAAAGAAAAATCGGAATCTGTTT TCCTCGTTTTTTTACAAGTTTAAAAATTTTTAGAAGCGGCAAAGAATTGCCCAAATTTT TTTAACTTCCAGTTTTTTTTTCTAAATTTTGGAATTTTCCGACTAGAATGAAACTTAGT TTATTTTCGCCAATTTCCAAAAACCACCCAACCTGAGT. Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
VC2200 C. elegans grl-22(ok2704) III. Show Description
W03A5.3. External left primer: TGACGGTGAGGACGTATTGA. External right primer: GCCACCGGATAGTTTTTCAG. Internal left primer: GGAGAAGATCATTGCCGAGA. Internal right primer: AAGTTGCCTTGAAAGTTTCCATA. Internal WT amplicon: 1221 bp. Deletion size: 573 bp. Deletion left flank: CGAGTCCGAAGGGGTGGATTTCATGTTCTG. Deletion right flank: CATTCTGCAAATGAAGGTTCTGAAGAAAAT. Insertion Sequence: TTCTGCAAATGAAGGTTCTTT. Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807