Laboratory Information
Name | LE View on WormBase |
---|---|
Allele designation | lq |
Head | Erik A Lundquist |
Institution | University of Kansas, Lawrence, KS |
Address | 5049 Haworth Hall 1200 Sunnyside Avenue Lawrence 66045 United States |
Website | http://www.people.ku.edu/~erikl/Lundquist_Lab/Home.html |
Gene classes | swan tiam |
Strains contributed by this laboratory
Strain | Genotype | Species | Description |
---|---|---|---|
CX3662 | lin-15B&lin-15A(n765) X; kyIs121. | C. elegans | kyIs121 [unc-115::GFP + lin-15(+)]; autosomal. Maintain under normal conditions. Reference: Lundquist E, et al. (1998) Neuron 21(2):385-92. |
CX3709 | unc-115(ky275) X. | C. elegans | Unc. Lon. |
LE1012 | ced-10(tm597)/dpy-13(e184) IV. | C. elegans | Heterozygotes are semi-Dpy and throw semi-Dpy, Dpy, and WT (which throw all dead eggs). |
LE1090 | tiam-1(ok772) I; ced-10(n1993) lqIs3 IV. | C. elegans | lqIs3 [osm-6::GFP] IV. Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011 (Submitted). |
LE1112 | tiam-1(ok772) I; mig-2(mu28) lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP + lin-15(+)]. Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011. |
LE1212 | lqIs3 IV; mig-15(rh148) X. | C. elegans | Unc. Egl. lqIs3[osm-6::GFP]. |
LE1213 | lqIs3 IV; mig-15(rh80) X. | C. elegans | lqIs3 [osm-6::GFP] IV. Unc. Egl. |
LE137 | unc-73(rh40) I. | C. elegans | 24% PDE axon guidance errors, 28% ectopic axons. Reference: Lundquist et al. Development. 2001 Nov;128(22):4475-88. |
LE1837 | rack-1(tm2262) IV. | C. elegans | Sick. Low brood size. Reference: Demarco RS, Lundquist EA. PLoS Genet. 2010 Nov 18;6(11):e1001215. |
LE1923 | fli-1(tm362) III/hT2 [bli-4(e937) let-?(q782)] (I;III). | C. elegans | Sterile. Gonad & rachis defects. Grow at 20 C. |
LE2113 | lin-15B&lin-15A(n765) X; lqEx463. | C. elegans | lqEx463 [rack-1::GFP + lin-15(+)]. Pick non-Muv to maintain. Reference: Demarco RS, Lundquist EA. PLoS Genet. 2010 Nov 18;6(11):e1001215. |
LE2290 | lqIs126. | C. elegans | lqIs126 [rack-1::MYC + osm-6::GFP]. lqIs126 rescues sterility, gonadal distal tip cell migration defects, and axon pathfinding defects caused by rack-1(tm2262). Reference: Demarco RS, Lundquist EA. PLoS Genet. 2010 Nov 18;6(11):e1001215. |
LE2336 | lqIs128. | C. elegans | lqIs128 [unc-25p::MYR::unc-40(constitutively active)::GFP + unc-25p::GFP]. Contains a myristylated, constitutively-active form of UNC-40. Slightly Unc. Reference: Norris AD & Lundquist EA. Development. 2011 Oct;138(20):4433-42. |
LE2418 | unc-73(rh40) tiam-1(ok772) I; lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP + lin-15(+)]. Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011. |
LE2492 | lqIs151. | C. elegans | lqIs151 [scm::unc-40::GFP + str-1::GFP]. |
LE2513 | tiam-1(tm1556) I; ced-10(n1993) lqIs3 IV. | C. elegans | lqIs3 [osm-6::GFP] IV. Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011. |
LE2514 | tiam-1(tm1556) I; mig-2(mu28) lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP + lin-15(+)]. Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011. |
LE2517 | tiam-1(tm1556) I; lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP + lin-15(+)].Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011. |
LE2531 | unc-40(n324) I; juIs76 II. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. Unc. Reference: Norris AD & Lundquist EA. Development. 2011 Oct;138(20):4433-42. |
LE2685 | egl-20(lq42) lqIs80 IV; lqIs58 V. | C elegans | lqIs80 [SCMp::GFP::caax] IV. lqIs58 [gcy-32::CFP] V. PQR migration defects: PQR in the head in the normal position of AQR. lq42 is a premature stop codon in egl-20. GFP expression in seam cells. CFP expression in AQR, PQR and URXL/R. Reference: Josephson M, et al. PLos One. 2016 Feb 10;11(2):e0148658. doi: 10.1371/journal.pone.0148658. PMID: 26863303. |
LE2717 | unc-73(rh40) tiam-1(tm1556) I; lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP + lin-15(+)]. Maintain under normal conditions. Reference: Demarco RS, Struckhoff EC, Lundquist EA. PLoS Genetics 2011. |
LE272 | fli-1(ky535) III. | C. elegans | Gonad & rachis defects. Grow at 20 C. |
LE2791 | lqIs170 X. | C. elegans | lqIs170 [F25B3.3p::vab-10(ABD)::GFP + ttx-3::RFP] X. Pan-neuronal GFP expression. Reference: Norris AD & Lundquist EA. Development. 2011 Oct;138(20):4433-42. |
LE2946 | cdh-4(lq83) III; lqIs80 IV; lqIs58 V. | C elegans | lqIs80 [SCMp::GFP::caax] IV. lqIs58 [gcy-32::CFP] V. AQR and PQR migration defects. lq83 is a hypomorphic allele of cdh-4. GFP expression in seam cells. CFP expression in AQR, PQR and URXL/R. Reference: Sundararajan L. et al. Dev Biol. 2014 Aug 15;392(2):141-52. doi: 10.1016/j.ydbio.2014.06.009. PMID: 24954154. |
LE3044 | cdh-4(lq97) III; lqIs80 IV; lqIs58 V. | C elegans | lqIs80 [SCMp::GFP::caax] IV. lqIs58 [gcy-32::CFP] V. AQR and PQR migration defects. lq97 is a hypomorphic allele of cdh-4. GFP expression in seam cells. CFP expression in AQR, PQR and URXL/R. Reference: Sundararajan L. et al. Dev Biol. 2014 Aug 15;392(2):141-52. doi: 10.1016/j.ydbio.2014.06.009. PMID: 24954154. |
LE3078 | lqEx631. | C. elegans | lqEx631 [tiam-1::CFP + str-1::GFP]. GFP expression in AWB amphid neurons. CFP neural expression in the head and tail, the ventral cord commissural motorneurons, the mechanosensory neurons (ALMs, PLMs, AVM, PVM) and the CAN, PDE, and PVD neurons. Reference: Demarco RS, et al. PLoS Genet. 2012;8(4):e1002665. |
LE309 | lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP + lin-15(+)]. |
LE3091 | juIs76 II; unc-6(e78) X. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. Unc. Reference: Norris AD & Lundquist EA. Development. 2011 Oct;138(20):4433-42. |
LE310 | lqIs3 IV. | C. elegans | lqIs3 [osm-6::GFP] IV. |
LE3190 | tiam-1(tm1556) I; juIs76 II; mig-2(mu28) lqIs2 X. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. lqIs2 [osm-6::GFP] X. lqIs2 carries a PDE/amphid/phasmid marker linked to mig-2. Reference: Demarco RS, et al. PLoS Genet. 2012;8(4):e1002665. |
LE3191 | tiam-1(tm1556) I; juIs76 II; ced-10(n1993) lqIs3 IV. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. lqIs3 [osm-6::GFP] IV. lqIs3 carries a PDE/amphid/phasmid marker linked to ced-10. Reference: Demarco RS, et al. PLoS Genet. 2012;8(4):e1002665. |
LE3192 | tiam-1(ok772) I; juIs76 II; mig-2(mu28) lqIs2 X. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. lqIs2 [osm-6::GFP] X. lqIs2 carries a PDE/amphid/phasmid marker linked to mig-2. Reference: Demarco RS, et al. PLoS Genet. 2012;8(4):e1002665. |
LE3193 | tiam-1(ok772) I; juIs76 II; ced-10(n1993) lqIs3 IV. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. lqIs3 [osm-6::GFP] IV. lqIs3 carries a PDE/amphid/phasmid marker linked to ced-10. Reference: Demarco RS, et al. PLoS Genet. 2012;8(4):e1002665. |
LE332 | lin-15B&lin-15A(n765) lqIs10 X. | C. elegans | lqIs10 [ceh-10::GFP + lin-15(+)]. lin-15(n765) mutation not confirmed after outcrossing. |
LE341 | ced-10(n1993) lqIs3 IV. | C. elegans | lqIs3 [osm-6::GFP] IV. Cell corpse engulfment defect. lqIs3 carries a PDE/amphid/phasmid marker linked to ced-10. Reference: Struckhoff EC, Lundquist EA. Development 2003, 130:693-704. |
LE3580 | ayIs9 II; lqIs220 X. | C elegans | ayIs9 [egl-17p::GFP + dpy-20(+)]. Reference: Tamayo JV, et al. BMC Genomics. 2013 May 4;14:304. doi: 10.1186/1471-2164-14-304. PMID: 23642123. lqIs221 is a Pegl-17::mab-5::gfp transgene. ayIs9 is a Pegl-17::gfp transgene. AQR migration defects. AQR in the tail in the normal position of PQR. |
LE3581 | lqIs221 V. | C elegans | lqIs221 [egl-17p::mab-5::GFP + gcy-32p::CFP]. AQR migration defects. AQR in the tail in the normal position of PQR. CFP expression in AQR, PQR and URXL/R. Reference: Tamayo JV, et al. BMC Genomics. 2013 May 4;14:304. doi: 10.1186/1471-2164-14-304. PMID: 23642123. |
LE3791 | lqIs250. | C. elegans | lqIs250 [unc-5::GFP + gcy-32::CFP]. Reference: Norris AD, et al. Development. 2014 Nov;141(22):4395-405. |
LE3845 | rdvIs1 III; egl-20(gk453010) IV; lqIs58 V. | C. elegans | rdvIs1 [egl-17p::Myri-mCherry::pie-1 3'UTR + egl-17p::mig-10::YFP::unc-54 3'UTR + egl-17p::mCherry-TEV-S::his-24 + rol-6(su1006)] III. Rollers, red fluorescence in vulvae. YFP cannot be detected. lqIs58 [gcy-32::CFP] V. Reference: Josephson MP, et al. PLoS One. 2016 Feb 10;11(2):e0148658. |
LE3846 | nfm-1(lq132) III; lqIs80 IV; lqIs58 V. | C. elegans | lqIs80 [SCMp::GFP::caax] IV. lqIs58 [gcy-32::CFP] V. AQR and PQR migration defects. lq132 is a hypomorphic allele of nfm-1. GFP expression in seam cells. CFP expression in AQR, PQR and URXL/R. Reference: Sundararajan L. et al. Dev Biol. 2014 Aug 15;392(2):141-52. doi: 10.1016/j.ydbio.2014.06.009. PMID: 24954154. |
LE3987 | etr-1(lq61) II. | C elegans | Dpy. AQR and PQR migration defects. Body wall muscle defects. etr-1(lq61) is a premature stop in alternatively-spliced exon 8. Reference: Ochs ME, et al. G3: Genes Genomes, Genetics. 2020 Jul 7;10(7):2365-2376. doi: 10.1534/g3.120.401182. PMID: 32398235 |
LE3992 | rdvIs1 III; lqIs80 IV. | C. elegans | rdvIs1 [egl-17p::Myri-mCherry::pie-1 3'UTR + egl-17p::mig-10::YFP::unc-54 3'UTR + egl-17p::mCherry-TEV-S::his-24 + rol-6(su1006)] III. lqIs80 [SCMp::GFP::caax] IV. Rollers. GFP expression in seam cells. Red fluorescence in vulvae. YFP cannot be detected. |
LE4098 | etr-1(lq133) II. | C elegans | Dpy. AQR and PQR migration defects. Body wall muscle defects. etr-1(lq133) is 2 bp deletion frameshift in alternatively-spliced exon 8. Reference: Ochs ME, et al. G3: Genes Genomes, Genetics. 2020 Jul 7;10(7):2365-2376. doi: 10.1534/g3.120.401182. PMID: 32398235 |
LE4325 | lqIs294. | C elegans | lqIs294 [unc-25p::myr::unc-5 + gcy-32p::YFP]. VD/DD axon guidance defects. YFP expression in AQR, PQR and URXL/R. Reference: Norris AD, et al. Development. 2014 Nov;141(22):4395-405. doi: 10.1242/dev.110437. PMID: 25371370. |
LE436 | swan-1(ok267) V. | C. elegans | F53C11.8. Homozygous. Outer Left Sequence: AGGCGGAGAAAGTGACTTGA. Outer Right Sequence: CCCCTCACGCAGTGTTTTAT. Inner Left Sequence: TGAAGCAAATTGCAATCCAG. Inner Right Sequence: AACGAAATTGTGATCGGAGG. Inner Primer WT PCR Product: 2317. Deletion size: 1190 bp. |
LE479 | juIs76 II; ced-10(n1993) lqIs3 IV. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. lqIs3 [osm-6::GFP] IV. Cell engulfment defect at 2-fold stage. Reference: Demarco RS & Lundquist EA. PLoS Genet. 2010 Nov 18;6(11):e1001215. |
LE554 | mig-2(mu28) lqIs2 X. | C. elegans | lqIs2 [osm-6::GFP] X. lqIs2 carries a PDE/amphid/phasmid marker linked to mig-2. Reference: Struckhoff EC, Lundquist EA. Development 2003, 130:693-704. |
LE6273 | src-1(lq185)/tmC20 [unc-14(tmIs1219) dpy-5(tm9715)] I; juIs76 II. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. Precise deletion of src-1 generated by Cas9 genome editing. Balancer marked with myo-2p::Venus. Heterozygotes are wild-type with Venus+ pharynx, and will segregate wild-type with Venus+ pharynx (heterozygotes), sterile adults without Venus in pharynx (lq185 homozygotes), and Dpy with Venus+ pharynx (tmC20 homozygotes). GFP expression in GABAergic motor neurons. Reference: Mahadik S, et al. bioRxiv 2023.05.20.541322; doi: https://doi.org/10.1101/2023.05.20.541322. |
LE6655 | tom-1(lq176) I; juIs76 II; lqIs345. | C elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. lqIs345 [egl-17p::mCherry + gcy-32p::CFP + scm::GFP]. VD/DD axon guidance defects. lq176 is a short isoform-specific allele of tom-1. Reference: Mahadik SS & Lundquist EA. Development 2023 Apr 1;150(7):dev201031. Doi: 10.1242/dev.201031. PMID: 37014062 |
LE6897 | src-1(syb7248)/tmC20 [unc-14(tmIs1219) dpy-5(tm9715)] I; juIs76 II. | C. elegans | juIs76 [unc-25p::GFP + lin-15(+)] II. D381A substitution mutation generated by Cas9 genome editing. Balancer marked with myo-2p::Venus. Heterozygotes are wild-type with Venus+ pharynx, and will segregate wild-type with Venus+ pharynx (heterozygotes), embryonic lethality (syb7248 homozygotes), and Dpy with Venus+ pharynx (tmC20 homozygotes). GFP expression in GABAergic motor neurons. Reference: Mahadik S, et al. bioRxiv 2023.05.20.541322; doi: https://doi.org/10.1101/2023.05.20.541322. |
LE712 | ced-10(n1993) IV; lqEx245. | C. elegans | lqEx245 [ced-10::GFP + osm-6::GFP]. Pick GFP+ animals to maintain. lqEx245 rescues ced-10(n1993). |
LE732 | lqIs27 IV; lin-15B&lin-15A(n765) X. | C. elegans | lqIs27 [ceh-23::GFP + lin-15(+)]. |
LE815 | mig-2(lq13) X. | C. elegans | |
LE948 | ced-10(n1993lq20) IV. | C. elegans | |
LE983 | unc-34(lq17) V. | C. elegans | |
MT10865 | unc-76(e911) V; nEx1039. | C. elegans | nEx1039 contains [ced-10p::GFP::ced-10 + unc-76(+)]. Maintain at 20 C. Described in Lunquist et al., Development 128, 4475-4488 (2001). |
Alleles contributed by this laboratory
Allele | Type | DNA Change | Protein Change |
---|---|---|---|
lq13 | Allele | substitution | |
lq20 | Allele | substitution | |
lq17 | Allele | substitution | splice_site |