Variation Information: ok3222

Nameok3222 View on WormBase
Species C. elegans
Genetic positionIV:-7.43 +/- 0.020 cM
Genomic positionIV: 2464430..2465284
Protein changeC45G7.3 Deletion

Strains carrying this variation

Strain Genotype Species Description
CB7007 ilys-3(ok3222) IV. C. elegans Viable, but defective in bacterial grinding and hypersensitive to bacterial pathogens. Derived by out-crossing parental strain VC2496. Reference: Gravato-Nobre et al. (2016) PMID: 27525822.
CB7172 ilys-3(ok3222) IV; lys-7(oj1385) V. C. elegans Viable, poor bacterial grinding, increased sensitivity to bacterial pathogens. Reference: Gravato-Nobre et al. (2016) PMID: 27525822.
CB7173 ilys-3(ok3222) IV; ilys-5(tm3151) X. C. elegans Viable, but with poor bacterial grinding and increased susceptibility to some bacterial pathogens. Reference: Gravato-Nobre et al. (2016) PMID: 27525822.
VC2496 ilys-3(ok3222) IV. C. elegans C45G7.3. External left primer: ATGCCAAAATCAAATGCACA. External right primer: CCACCTAAACACTTCCGTCC. Internal left primer: CTCCACTTCCTGTTTGCCAT. Internal right primer: TATGGGGTTTCCTGCAGATT. Internal WT amplicon: 1156 bp. Deletion size: 855 bp. Deletion left flank: TGAACTGTATCTTTGGTAGAATGGGTAGTA. Deletion right flank: CAGGGAGCATGCGAAGTGATGGCTCGTAAC. Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807