Variation Information: gk3217

Namegk3217 View on WormBase
Species C. elegans
Genetic positionIII:-1.01 +/- 0.004 cM
Genomic positionIII: 6699641..6699800
Protein changeF37A4.7a F37A4.7a F37A4.7a F37A4.7b F37A4.7c F37A4.7d Definition Deletion

Strains carrying this variation

Strain Genotype Species Description
VC2340 W02D9.3(gk1128) I; rbf-1(gk3217) III; srh-145(gk3218) V. C. elegans This strain is homozygous for a deletion (gk1128) in W02D9.3, detectable by PCR using the following primers. External left primer: ACGGATTTTGCCACTTTGTC. External right primer: CATCACATTTCTCGTGGTGG. Internal left primer: TTGGAGAGGTGTGAACGTAGAA. Internal right primer: TTTCTAGGCCGTACGTTGCT. Internal WT amplicon: 1621 bp. Deletion size: 1315 bp. Note: internal left primer binding site deleted in gk1128; major deletion product from nested PCR runs at about 650 bp. Deletion left flank: GCAGAAAAAATTTTGGAATTTGAGCTACAT. Deletion right flank: CATTTTCTTGCAGAAAAACGTGCAAAATTC. Validation: gk1128 passed by CGH. Other deletions (gk3217, gk3218) identified by CGH. Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807