Variation Information: e1490

Namee1490 View on WormBase
Species C. elegans
Genetic positionV:6.09 +/- 0.018 cM
Genomic positiongenomic coordinates unknown or not listed
Protein changeprotein change unknown or not listed

Strains carrying this variation

Strain Genotype Species Description
EM140 dpy-5(e61) ram-1(bx34) I; him-5(e1490) V. C. elegans Dpy. Rays abnormal.
EM141 unc-17(e113) col-34(bx25) IV; him-5(e1490) V. C. elegans Unc. Abnormal rays. bx25 previously called ram-4.
EM146 dpy-10(e128) ram-2(bx39) II; him-5(e1490) V. C. elegans Dpy. Abnormal rays.
EM172 unc-4(e120) II; him-5(e1490) V; lin-32(bx46) X. C. elegans Missing Rays. Unc.
EM207 tbx-2(bx59) III; him-5(e1490) V. C. elegans Conditional lethal: inviable when grown at 25C. Wild type at 16C. Viable when grown at 20C; partial ray loss at 20C. Shifting males during ray assembly to non-permissive temperature results in ray loss. No lineage defect.
EM253 mab-20(bx61) I; him-5(e1490) V. C. elegans Ray 3 and 4 fusion >60% at non-permissive temp. Ray 1 and 2 fusion about 10% at non-permissive temp. ts period is around L3-L4.
EM305 efn-4(bx80) IV; him-5(e1490) V. C. elegans Extensive ray fusion involving all 9 rays. Larva have Vab phenotype with decreasing expressivity in adult. Hermaphrodites have swollen tail and anus. bx80 pka mab-26(bx80).
EM331 him-5(e1490) V; mab-19(bx83) X. C. elegans Male phenotype: loss of rays 7-9; incomplete penetrance/expressivity (80%); T lineage defect. Hermaphrodite phenotype: lowered brood size (100 progeny/hermaphrodite). Hypomorphic allele: uDf1/mab-19(bx83) results in embryonic arrest during morphogenesis.
EM347 tlp-1(bx85) IV; him-5(e1490) V. C. elegans Although hermaphrodites appear WT in other ways, there are some problems with T cell lineages (affecting the phasmids) and tail cell fusions. Variably Dyf. Male tail tip morphogenesis is also defective, resulting in blobby, "leptoderan" tails. Males are infertile due to an inability to properly copulate. tlp-1 encodes a nuclear protein with a single C2H2-type zinc finger domain and an N-terminal "SPLALLA" domain, similar to that of Sp1 transcription factors of vertebrates. The bx85 mutation involves a truncation of TLP-1 due to a frameshift caused by a 5-bp deletion.
EM489 pal-1(e2091) III; him-5(e1490) V; dpy-22(bx92) X. C. elegans V6 produces rays instead of alae in pal-1; sop01 mutants. No obvious phenotype in a pal-1(+) background. Previously called sop-1(bx92).
EM490 pal-1(e2091) III; him-5(e1490) V; dpy-22(bx93) X. C. elegans V6 produces rays instead of alae in pal-1; sop01 mutants. No obvious phenotype in a pal-1(+) background. Previously called sop-1(bx93).
EM493 sop-3(bx96) I; pal-1(e2091) III; him-5(e1490) V. C. elegans V6 produces rays instead of alae in sop-3; pal-1 mutants.
EM496 hlh-2(bx108) I; him-5(e1490) V; lin-32(e1926) X. C. elegans Males are rayless. hlh-2(bx108) strongly and semi-dominantly enhances the ray-loss phenotype of lin-32(e1926).
EM507 pal-1(e2091) III; him-5(e1490) V; dpy-22(bx103) X. C. elegans V6 produces rays instead of alae in pal-1; sop-1 mutants. No obvious phenotype in a pal-1(+) background. Previously called sop-1(bx103).
EM511 pal-1(e2091) III; him-5(e1490) V; dpy-22(bx107) X. C. elegans V6 produces rays instead of alae in pal-1; sop01 mutants. No obvious phenotype in a pal-1(+) background. Previously called sop-1(bx107).
EM598 hlh-2(bx115) unc-13(e51) I; him-5(e1490) V. C. elegans Paralyzed Unc. Throws males. hlh-2(bx115) has no phenotype in this background.
EM599 him-5(e1490) V; lin-15B&lin-15A(n765) X; bxIs13. C. elegans bxIs13 [egl-5::GFP + lin-15(+)]. Him. egl-5::GFP reporter made from EM#286 (GFP inserted within the last few amino acids of the C-terminus) by integrating bxEx30 in EM588. High nuclear expression of transgene in males (good in seam cells, none in rectal epithelium), weak expression in hermaphrodites. Expression in 2-4 head neurons in males and hermaphrodites. egl-5 gene on reporter does not rescue egl-5(-).
EM62 mab-17(e2167) unc-15(e73) I; him-5(e1490) V. C. elegans Unc. Round bulging adult male tale. Very reduced fan. Mating efficiency is zero.
EM66 him-5(e1490) V; vab-3(bx23) X. C. elegans Transformation of ray 6 to a thin ray which is anteriorly displaced and fuses with ray 4 (99%). Body is slightly shorter. See also WBPaper00002235.
EM67 mab-20(bx24) I; him-5(e1490) V. C. elegans Extensive ray fusion. Posterior portion of body swollen at larval stages.
EM68 col-34(bx25) IV; him-5(e1490) V. C. elegans Lumpy rays. Temperature sensitive. bx25 previously called ram-4.
EM723 sop-2(bx91) II; him-5(e1490) V. C. elegans Temperature sensitive. Early larval arrest at 25C. At 20C, Lon, PVul, Muv, Mog, ectopic Hox gene expression.
EM81 him-5(e1490) V; ram-5(bx30) X. C. elegans Lumpy rays.
EM886 rax-2(bx131) III; bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM902 madd-2(bx132) bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM905 rax-5(bs137) II; bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM907 rax-3(bx133) I; bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM908 rax-3(bx138) I; bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM909 rax-4(bx139) I; bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM911 rax-6(bx140) IV; bxIs14 him-5(e1490) V. C. elegans bxIs14 [pkd-2::GFP + pdx-1]. Ray axon defective.
EM938 pdfr-1(bx142) III; him-5(e1490) V. C. elegans Male leaving assay defective (Las), lethargic, hypereversal. Reference: Barrios, A, et al. Nat Neurosci. 2012 Dec;15(12):1675-82.
EM97 ram-2(bx32) II; him-5(e1490) V. C. elegans Lumpy rays.
EU1472 let-99(or204) IV; him-5(e1490) V. C. elegans let-99(or204) is temperature-sensitive, maternal-effect, embryonic-lethal. Nearly completely penetrance of lethality at 26C. Viable at 15C. Maintain at 15C. Reference: Goulding MB, et al. J Cell Biol. 2007 Sep 24;178(7):1177-91.
EW61 dpy-20(e1282) IV; him-5(e1490) V; deIs4. C. elegans deIs4 [ajm-1::GFP + GFP::lin-39(YAC) + dpy-20(+)]. A transcriptional fusion of GFP to the ATG of lin-39, with a stop codon between GFP and LIN-39 sequences. Present on a YAC. Yeast chromosomal DNA was injected and integrated. Expression is very faint and may get fainter over time. Freeze upon receipt.
EW62 smg-1(e1228) I; dpy-20(e1282) IV; him-5(e1490) V; deIs4. C. elegans deIs4 [ajm-1::GFP + GFP::lin-39(YAC) + dpy-20(+)]. A transcriptional fusion of GFP to the ATG of lin-39, with a stop codon between GFP and LIN-39 sequences. Present on a YAC. Yeast chromosomal DNA was injected and integrated. Expression is very faint and may get fainter over time. Therefore, freeze upon receipt.
GC771 him-5(e1490) V; naEx57. C. elegans naEx57 [lag-2p::FLP::let-858 3'UTR + ceh-22p::GFP]. Him. Derived by injection of plasmids pGC158 and pCW2.19. Reference: Voutov, R and Hubbard, EJ. Genetics 180(1):103-19 (2008).
GE1709 vab-9(e1744) unc-4(e120) II; him-5(e1490) V. C. elegans Unc. Slightly Dpy. Tail whip knobbed at all stages except adult male (adult male tail tip slightly swollen). Variably Egl.
HS144 msi-1(os1) III; him-5(e1490) V. C. elegans 1.6 kb deletion in msi-1. Males have poor mating efficiency.
HY618 apc-1(or374) II; him-5(e1490) V. C. elegans Temperature-sensitive embryonic lethal, maintain at 15C. Shift L4 hermaphrodites to 25C overnight for mutant embryos. Mutant embryos are sensitive to osmolarity and pressure. Previously called pod-3 and mat-2..
HY619 apc-1(or385) II; him-5(e1490) V. C. elegans Temperature-sensitive embryonic lethal, maintain at 15C. Shift L4 hermaphrodites to 25C overnight for mutant embryos. Mutant embryos are sensitive to osmolarity and pressure. Previously called pod-3 and mat-2.
HZ107 him-5(e1490) bxIs13 V; nfya-1(bp4) X. C. elegans bxIs13 [egl-5::GFP + lin-15(+)]. Him. Unc. Ectopic expression of GFP in head neurons.
HZ111 muIs16 II; sor-1(bp_1)/qC1 [dpy-19(e1259) glp-1(q339)] III; him-5(e1490) V. C. elegans muIs16 [mab-5::GFP]. Larval lethal at L3/L4 stage. Ectopic expression of GFP in the arrested sor-1 mutant homozygotes (L3 stage). NOTE: This allele is published as bp1, but has been curated in WormBase as bp_1 in order to differentiate it from the STS marker bP1.
HZ112 muIs16 II; sor-1(bp3)/qC1 [dpy-19(e1259) glp-1(q339)] III; him-5(e1490) V. C. elegans muIs16 [mab-5::GFP]. Larval lethal at L3/L4 stage. Ectopic expression of GFP in the arrested sor-1 mutant homozygotes (L3 stage).
HZ113 him-5(e1490) bxIs13 V; nfya-1(bp5) X. C. elegans bxIs13 [egl-5::GFP + lin-15(+)]. Him. Unc. Ectopic expression of GFP in head neurons.
HZ1683 him-5(e1490) V; atg-2(bp576) X. C. elegans Him; ~30% male.
HZ1684 atg-3(bp412) IV; him-5(e1490) V. C. elegans Him; ~30% male.
HZ1686 bnIs1 I; atg-7(bp411) IV; him-5(e1490) V. C. elegans bnIs1 [pie-1p::GFP::pgl-1 + unc-119(+)] I. Him; ~30% male. Accumulation of GFP::PGL-1 aggregates in somatic cells in embryos.
HZ1687 atg-9(bp564) him-5(e1490) V. C. elegans Him; ~30% male.
HZ1690 epg-6(bp242) III; him-5(e1490) V. C. elegans Him; ~30% male.
HZ1691 epg-8(bp251) I; him-5(e1490) V. C. elegans Him; ~30% male.