>Y110A2AL.12a.1 unspliced + UTR + 2000 upstream + 2000 downstream;
-ive strand; Sequence: 11492 bp
>Deletion size = 3569 bp
>pigw-1 sgRNA #1, Chr II, GATTGATAGGCAGACTCCGG; cut=2879222;
strand=+1; GC=55; 3'GG=yes; folding=-0.9
>pigw-1 sgRNA #2, Chr II, GATGATGGATGTCGGAGTGG; cut=2882756;
strand=-1; GC=55; 3'GG=yes; folding=-2
| Name | Type | Orientation | Position |
|---|---|---|---|
| Y110A2AL.1_Unspliced_UTR | gene | forward | 1..1350 |
| pigw-1-1 SV F | primer_bind | forward | 2764..2783 |
| pigw-1 Upstream Homology Arm | misc_feature | forward | 3337..3786 |
| Left Deletion Flank | misc_structure | forward | 3757..3786 |
| pigw-1 sgRNA #1 | protein_bind | forward | 3787..3806 |
| pigw-1-1 WT R | primer_bind | reverse | 5701..5722 |
| pigw-1 sgRNA #2 | protein_bind | reverse | 7336..7355 |
| pigw-1 Downstream Homology Arm | misc_feature | forward | 7356..7705 |
| Right Deletion Flank | misc_structure | forward | 7356..7385 |
| pigw-1-1 SV R | primer_bind | reverse | 9429..9450 |
| Y110A2AL.13.1_Unspliced_UTR | gene | reverse | 10096..11492 |
ttataaatttacaaaaaatattttgatctagtgggaattgaacccatgaccttctgggccttagtcatcgaaaatcccactgcgccatttggactctttttttgaaaattgataaaattcgaaatttgtaacttctgaaatacttccggatgtgtctattaaatgcacctgatagtgagaaaaatatttaaccccgaggggaattgaaatcttggccttctgggtctcaaccattgaaaatcccactgcgccattgggacactttttttgaaaattggtaaaatctgccaaaaaaaattttttccctattttttcgaacgattttaaagttttttcaaagccaaacttcacacattttgtctagtttttttttagaaaatttatccgaattttcagacctttttattttttcaggagtaccgtaggaattgcctgggagagaagcgaacagctgtggaaaatgtcatcaatgcaaaagtggtcgcttggaacctggcagtggtccgtaggcgacactacttcgacctgcacggaatgacgccgcaaggagccgtcgactttgtggctcagatcgttgaagggaggaggccaggctgtatgtttttgagtttacgtgaaagaaaattaaattttaagaatttttgtagttgagaatttttcgatatctcaattttctgccgagttattgaagttttagaaacaactatttgaaaacgaatatatctccccagggtttaaagctatcaaaaaattgttaactagtaaaatatagaaaataaaattctaaacatttaattagttgaaaacttttttctatcttaactctccgccgagatacggcagtttaaagtgagacaaagagagagaggagagacgcagaccgcctcgccgtctgcgtctctcccccctccctcactcttttgcgcactaaacttcaaagccctgtaactttgcaggtatttaagctagaaaaaagtttccaactaacaaaatgtgtgaaattttacgcagagtatgattattttaaaaaaaatcctaaaaattttcagatataaaactcgaaactggacgcggcaaccattccaaggacaacattccggcgattcaaaaccggctgcttcaggattttggcaatctttccggatttcaaatcgccatcgacccgagcaatttaggagttctaattctcagttttcagtgatttgttctgtactattttcgtgtatttcggtgtaatttcatttttgtcatattcttgcagttcatattttgtcattattgtttattgtactattattataatattatttattaatatggtgtacataataaacttgatacaaatttcaaaaacattgagcctccgtatctcaacagtggtttaatttatcaaaaattgccaaaacgcagaatgtagagctaaaaattctgcacatttcaccagttgaaaattttttgatagctctaccgcgagcagagatacagctggattaaggaaacgaggagacgcagacgacgagagaacccacacactctctctctcgcgcgcgcgccaaacttcaaacctctgtaactttgcgagttttacagctagaaaaaaatttccaactatggccatgtgtagaattttaaggcctatctgataatattaatattaaatcaaaactctaacgcggtaaaaactttgaaccttcgtatcttggcaggtattagaattatcggtaaaattacaacagtaaaaatgaggagctaaaaattctgcacatttcatcagttgaaagttttttgatagctcttccctccgcagagatacagctggataaggaaacgactagacgcagacggcgagagagcctgcgtctctcccctcccacactctctctctctctctcgcgcgcgctaaactttgaggctctgtaactttgcgagttttacagctagaaaaaagtttccaactaagaaaatgtgtagaattttaagatctatcagaagaaccattcatctatccaataaaatttattcgaaaaatttcgttgtgagagccgaaaaaacaaataaataagagtttacaagttcgggagatccagaaaaaaaacgatcaaaaaattacagacaatgagtgaaaaaaaaaactagaaatcaggggggggggacaagagacagtgaaagatttggtggccgaggaaatggggaaaactaggccacgtggcagaaaaaatgcaaaaaatacagaaaaagagaggtagaaatctgaatattatgaatgtgaaaaaaaattaaaaattcgagaaaaaaatttaaaatgcattagaaatgtgcgtattttggggggaaataaagaaaggggcggggcgtattaggccacgcccacaaaatggacatcgagctttttgcagaaaaaaagtgagagaaaaaaaaactggaaaactttttttgcgatttttttttgatggccgccaaaaaaaaaactcggccaccaaaacttttttttggtggccgaggtttctctttcacggccatgggaaatttttctttaaaaaatcgcttttttgaaaattttcacaaaaaaaaaaggccgcggccgccaaaaattgtttggtggccgagtttttgtttggcacggccacggaaaaaacaaagattttcccaaaaattcttaaaaataaaaaacatggccgcaaacgaaaaaactcggccaccaaaaatgttttgatggccgatttttctttttggcagccacacgagtcgattttttatcaaaaatttcgatattttcgtgccccccgcgaatgagaaaactcggtcaccaacaaaaattagcttttttttttcggaaaatcgatggcaaaaattgtgaaaattcaatttggaggccgagaaaaaactcggccaccaaaaatttattggtggccgagttttctctttggcggccacgtaaaaaattcgtgaaaatctcgattttcttctaattttttttggcaaaaatttgacttttacatggccaccggtgagaaaactcggccaccaacagaaattagcttttttttgcgaaaaatcgactgcaaaaattgtgaaaattcaatttggaggccgagaaaaaactcggccatcaaaaaatttattggtggccgagttttctctttggcggccacgtaaaaaattcgtgaaaatctcgattttctgctaattttttttggcaaaaacttgacttttacatggccaccgatgagaaaactcggccaccaacagaaattagcttttttttgcggagagaaaaaactcggccaccaaaaatttattggtggccgagttttcatttcggcggccacgtaaaacattttaggcaaaatttaaatttcacatggccgtcaatttgaaaactcggccatcaacaaaatttgcaatatttcaacaaaaaaaatggtacaaattatgcattttccatcattttttcggcgaaaaagcaaaaaaattctctaaaatttcagaaattCTACTCGGCGTGGGGTCTCGTCGCAAATTTAATTTTCCGGTATTCTAAAAAGTGCATGAGACCGGTGCACACAGTGACATATGCCAAGAGAATGGGGAAGGCAATGTGCGGAGGCTGGCGATGAGCATCAACCGAGAGGTTGACAAGGCCTGTGAGCACATTTGAGACGAGGAAAAAGAGCAGTGAGTGGCGATTTATAGAATCAGAAAGACACGGAGACACCACGGAATACGGATCTTCGCCATTTGAGAACTGCGGGAAACTGGAACACCAGGCGACTGTATTGAACATTTGGATTGATAGGCAGACTCCGGTGGCGAAGGTCATGAGGGTTAActgaaagaagaagaaggaattttacatcaaaaagtgctctcacaacgatgctccgttattccgggtgtgtgggcggagcttgttataagcggagtgtcgttgtaaattaattagacattgaacattgctcgatttgcaattttttcgctgagaaaattagaaattcggccaccaaaaaatgtttggcggccgagtttttttggcggccacgctttttcgaattttttttaaatcgttgaaaaagtgattttttaagaaatttatctcgtggccgtgaaactgaaaactcggccaccaaaaaaaaattttggtggccgagtttttttttttttttttcgcgtttttcgtttttatcaatttttgggaaaaaaatcagaaacgtttttgcgtggccgtgcaaagaaaaaaaatctcggccaccgataaaaattttggtggccgacttatttgtaaaaattttcaaaaatattaagcttaaaaaaatcggcaaaaaagttatttttctataaaattttttcgtggccgtgaaagaaaaaactcggccaccaaaaaaaattttacatcaaaaagtgctcacacaacgatgctccgttcttccgtacaaacggagcgtcgttggaaacaaatttgacatcgaaaattgctctcggggggtgatttttggctttttagcccatttttagcccaaaaaatttgaattttggactaaaaattggcctaaaaatcgaattttggacaatttttcgttttttaatttttttttcgtaaaaatcacttgaaaatttcaatttttggcctaaaaatcgactttttctaacttattttagttcagaaagaaatcgacgccgaaaattgcttgctcacaacgatgctccgttcttccgtatcgaaaattggcgattttcaactttttcgcccgaaaaattgatggaaaagtgggaaaattagactttttaagaaatatttttttcaacgcggccgccaaagggaaaactcggccaccattttttttgttgaaaatttgcaaattttgctggtggccgagttttctcattgtcagtgccatgtaaaattctattttttgccgaacatttacgaaatttttttcgtggccgcaaaataactttggtggccgaatttttaggaaaaaatcagaaacttttttcccgtggccgtgcaaaaaaaaaaaaaacttcaccgaaaaaaattttggtggccgaatttttcgtaaaaaaaaaaatatttagcttcataaaatcgttaaaaaatgtgattattctagaaatgtttctttttttctcgtggccgtgaaagagaaaaactcggccaccgaaattttttttttattttttcggatttttcggcaaaaaagtgggaatcaacgccgaaaatcgctcgcaacgacactccgttcttccgcgcgcgcgaggaattaacaaattgatctacCTGTGAAAAGATATACGTGGCATTAACCACACGTCGACACGGTGGGTCAACGCATTTTTCGGCGGCAATTTGAATAAAAAATAGGATCAGCGAGAGTGCGAAGAGCTGGAAGCATCGGCGGATCCACGATTTGATGCGGATGctgaaaaaaaaattttttttttttgtgaaaatttgaattttttcgttttggcgggaattcaaatcacCTAGTCTTCGCCATAAACTCTCCGATGGCCAAACTCGCGTAGAATATCGTCAAATATCCCATGAGTGACGTCAGACCCTCCGCGTTGGCGGTGATCAGATTCTCGCGGCGATTCGCCGACTCGTCAAGGATCCATGCCTGGAGCCCCGTGGATTTGAGCATTGTTTGATGGCAAATTCCAAAGATCACAGAGAGAACGAGAGGGTAGCAGCGTGGCAGAATTGAGGAGGACAGGATctggaagaaaaatttgaaaaaaatctaaaaattccagattgtagtcccaatggatgcagaatctaattctgatcctttctgctttttgaagttttttgatagctctccccattgcagagatacacgcgatcaaagtttcgcggcgagagagtgtatggggaggggagacgcagcaggggtgcgcgccgccgcgtctcccctcctcacacactctctcacctctcagcttcaaatcagtgtatctctgcagcggggagagctatcaaaaatcttccaattgcaaaaatgatcagaattgaattctgcgtcgattggcactaatttccagtggcctagttttccaaaaaaaactcggccatcgtacCCTGATAGCGGCCATCGTGAAGAAAAAGTTCCAATGAACGCCATATTCGGTGACGTGTTGCGGATAGCCAATCACTTCGAGGAGCACAGCACGGCCGGCTCCGAGAGCAAATAGAAGAAATGTGGAGCTGAGGTACCACGGGCGGGGGGAATGGctggaaatttgattttttttttgtgggaaatcgacaacgaaaattgctcacggggtgggtgatttttggcgtttttagcccgtttttaagccaaaaattttgaattttccaactttctcgtcgatttttaggtaaaaatggcctaaaaattggatttttccgctaatttttgagttttttgattagaaatcgacaccaaaaatggctcggcgggtggtttttctgcgtttttagctatttttcggtaaaaaatgctgaaattttgaccttcctcgtcgatttttaggtaaaaatggcctaaaatttgggtttttcgccaattttgcgccaaaattcaattttctacgatttgagcaaaaatctacaacacaaattgctctctgggtggtttttcggcgtttttagccatttttcgagcaaaaattctggatttttggcttttcaaccgctttttgagcatatttggcctaagaaactggattttttcgccaaattttgagcctaaactcaattaaaattttctacgctttgagcaaaaatcgacagcataaattgctcatggggtgattttcgacctttttagaccgttttaagccaataattttgaaattttggcgtttcttatcgatttttaggtaaaaatgggctgaaaactgtatttttaagccattttttgagccaaaactcaattttatacgctttgagcaaaaatcggcaacaaaaattgctcgggggtgattttcgacgttttaggcagtttttcggccaaaaatttcggattttcaggctttcttatcgatttttacataaaaaagccttttaaaaatggatttttaagccaatttttgagccaaaactcaattaacggaaatcgacagcccaaattgttcaattgttcactgggttattttcgtcgctttttagccatttttcgaccaaaaatttcagattttttggcttttcaaccgctttttgagcacatttagccaaaaaaacgtgattttttttcgcggattgctcacTGTGAAAGTTGTCGTCCGGAGCTCGGCGACTTTGCCATTCGGCTGCCTAGCGCCGCCTGAAACAGGAAAGCCGCCACTCCGACATCCATCATCGAATGTCCGAATTTCTCGGTTTTTGCGTATTTTCTCGGAAAAATCGGAAAATCCACAGCCAAAATGGCGAGAGTGACCAAAATCATGGTAAGGGACCGGAAATAGGTGACAAATTGCGTGGGTTTATGCTGTTCTTCGACGAATCGACTCCACGATTGTCGAAGAATCACGGAGAGCTGATGGTGGTTGTGGTGTTGCTCGGCGGCTTCGAAGAGCACAAAAATGAGCAAAACTGCAGAGATGATGATCATTATGGTGGAGAGGAGGATGAGGTGCTCGTTGAGCACTGTCATTGCGAGAAGGGATGGAACGCAGAGGAATATGACGTCGGCAACGAATTTTAGCCAGTAGGTGAATctgcaaaattgggagggaatttgagggaaaaaaagttttttggaattaaaaaaaaaaattttttggactaaaaaaaattgttttcgaaattttttttggaatttttttggaatttaaaactataggttattggctaaaaattcagaaaaatccaaaaaaaaaacattttttttttggaacttttttgaatttttttggaaactgtttggaattttttttcaaggaattttagccagtaggtgaatctgaaaattggggggaatttaagaggggaaaattttttaaacaaattattttttggacttaaaaaaagattttttggaatttttttcaggagtaaaaaatttttttttttgggttctctttaggataaaaattttttttcggaatctctgggtttttttgagcaaattttaggttaaaaagcttaatttttgaaatttttatattgaaatcataataaattggctaaaaaccgaaaaaatccaaaaaaaatcacaaaaaaaaatgtttttgtgattttttttcagattttttttaatttcaaaaaaaaatttcagaactttttttggaatttttttagattattttcagattttttttggaatttaatttgtttttttttttttgaaaattttttggaaatttgggttttttgtgcaaattttaggttaaaaagcttaatttttgaaatttttatattgaaatcataataaattggctaaaaaccgaaaaaatccaaaaaaaatcacaaaaaaaaatgtttttgtgattttttttcagattttttttaatttcaaaaaaaaatttcagaactttttttggaatttttttagattattttcagattttttttggaatttaatttgtatttttttttttgaaaattttttggaaatttgggttttttgtgcaaattttaggttaaaaagcttaatttttgaaatttttatattgaaatcataataaattggctaaaaaaccggaaaaatccaaaaaaaatcacaaaaaaaaatgtttttgtgattttttttcaaaagttttttaatttcaaaaaaaaatttcagaattgtttttggattttttttttggaatttttttggatttttttttggaatttttttggaaaattttttggattttttttggattttttttttttggaatttttttttggcattttttgaaatttcttttttgaaatttctcttttttttggaaaatttcagagtaatttcaaaaaaaatttttccaaattttagtctaaacaaatttaatttcagcatacttaaaactatatgatattagctaaaaatacagaaaaaatccaaaaaaaaaaatccgaaatttgttttttttttttgaattttttttacaacttttttgtttaaaaataaggcgtttttttttcaaattttagtatcaaaaaattgtaagctgtttaattattctttgaaattgggtaaaaaaacagaattttcaaaaataatttttttttggaaaatttggaaaaaatttttttttccaaaaattaaaaaaaaaattgttttcaaaattccaaatttcctcgcggctcaaaattcggccccgcacCTTCCGGTATCATATCGTCGTCCTAAGAAAATCCACGGCAACGTTAGATTCCGTATAAAAAGTCCCAACATTGTGATGAGGAACGTCAAAAAGAGCTCCCGTTGAGCACATCCTGTCAGTGTTCCAACGAATGAACTGTGCTCAGTTGTTGCTCCGACATCGGCTTGGCTCATttaaatgtgtgtctctggaaaaaatgttgaaatttgagaggataaaaatttttttttgaaaaaaaaaattttttttttgagtgttttttaaactgaaattccttaaattttaggcagttttcagcaaattttattcaaaaaataacaaaaatctgttaaatacctttttttttaattaaaaacaattctgaaaaaaacctaattttttcagacattttctgccagttttttctgaaaattcataatttttaaaagtatttttatcgaactttattccaaactgaatgaaaatataatttttaaaattaatttcagacaaaaatttgaaaaaaaataactttcgaaattttttttttcagaaaaaaaattcaaaaaatggttttatttttcaaattttcatttaaaaattctttaaaagattttttcaattttttcagaaacattatttaaaaaaaacgatttttttcaaaattacagagaaaaaatcaaaaatatttttttcaaaaaattttctaaaaata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