Gene Information: cca-1

Namecca-1 View on WormBase
Species C. elegans
SequenceC54D2.5
Genetic positionX:-1.06 +/- 0.020 cM
Genomic positionX: 7847678..7875954

Strains carrying this gene

Strain Genotype Description
BC14060 dpy-5(e907) I; sEx14060. sEx14060 [rCes C54D2.5a::GFP + pCeh361]. Maintain by picking WT. WT animals are GFP+. Strain construction supported by Genome British Columbia and Genome Canada. Please acknowledge McKay et al, Cold Spring Harbor Symposia on Quantitative Biology 68: 159-169 2004 (WBPaper00006525).
JD21 cca-1(ad1650) X. Slow pharyngeal pumping. Abnormal pharyngeal muscle depolarization.
RB2487 cca-1(ok3442) X. C54D2.5 Homozygous. Outer Left Sequence: tgaacaactgaacaccgagg. Outer Right Sequence: tcaacggtatggctcaaaca. Inner Left Sequence: tgtgcagcaaatcagaacaa. Inner Right Sequence: gcaaggaagaagaaaagcga. Inner Primer PCR Length: 1264. Deletion size: about 600 bp. Attribution: This strain was provided by the C. elegans Gene Knockout Project at the Oklahoma Medical Research Foundation, which was part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807
VC39 cca-1(gk30) X. C54D2.5. Mildly Unc, slow-moving. External left primer: TCGGAGATGGTGATTCTTCC. External right primer: TGATGGAGTCCGGATAAAGC. Internal left primer: TTGCTTTCTCGCATCCTCTT. Internal right primer: TTCCAAGCTCTGGTGGTTTC. Internal WT amplicon: 1379 bp. Deletion size: 267 bp. Deletion left flank: GCGCCACAAAGTAAAGAGCTGCCCATGGGT. Deletion right flank: CTCGAGATAACTTGAGCGCTGGTACACTGT. Attribution: This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence WBPaper00041807